Hello MaX
1. The baby was crying for hours.
Here, you have a simple sentence with only one clause. "The baby" is the subject of "was crying". So you can't rephrase it.
2. Scientists struggling to develop a vaccine for bird flu have announced a breakthrough.
Here, you have an embedded clause:
2a. Scientists | struggling to develop a vaccine for bird flu | have announced a breakthrough.
"Scientists" relates both to "struggling" and to "have announced". So you can rephrase it like this:
2b. Scientists | (who are) struggling to develop a vaccine for bird flu | have announced a breakthrough.
MrP