taking out the windows of the car

Sorry. I used window and window glass interchangably in the context of cars because it's understood that the frame of a car window is not detachable since they are a part of the door. So I loosely interchange them. By the way, literally pulling out a window without first removing the bolts that fix the window onto the window regulator will break the glass, as far as I know. I might have misunderstood your question entirely. Maybe we're not on the same page here. 
 Please correct me if I'm wrong.

(Edit: May be irrelevant
Using suction cups or hands to push down a window forcefully but gradually usually will not break the glass. However, the cable will tangle or break as a result and the regulator will have to be replaced. The most frustrating thing is some regulators are sold together with the motor so
you might need to buy pay for the price of a motor though it's still intact. :(

)

Thanks Goodman. LOL. I like the last example.
I always hear that in the movies. The bad guy will say "Take him out" when referring to killing a hostage or someone.

take out some Chinese. That's hillarious!

The first time I heard, "I'm ordering Chinese". I was shocked!!! Then the guy said, "What do you want (to eat)?"

I see why you said glass now. You weren't talking about window glasses. I'm sorry. No bolts involved definitely. But it must be done in a glass workshop because they need to seal the gaps using some heat emitting device. I have no idea because obviously I have never done this though I intended :p

the flange of the window openning

Why do you refer to the windshield glass as window ? Is it considered a window? I'd like to know.